BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E04LP1|AL425704
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1601 1489 0.0
>3x_Contig1601
Length = 11162
Score = 1489 bits (750), Expect = 0.0
Identities = 761/766 (99%)
Strand = Plus / Plus
Query: 1 gatcctgaagtaccaattgctccaacttttggaaaactttcaatgcaatttcgtcgtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gatcctgaagtaccaattgctccaacttttggaaaactttcaatgcaatttcgtcgtcta 1434
Query: 61 aatgtatcaataatgttgcgagtttttgggccgcagattctctgaccggtgccacggcgg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1435 aatgtatcaataatgttgcgagtgtttgggccgcagattctctgaccggtgccacggcgg 1494
Query: 121 tatcgttaacaaaatcgctgaatctatccaatgcmaaaattgttaggagacgagtagcta 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1495 tatcgttaacaaaatcgctgaatctatccaatgcaaaaattgttaggagacgagtagcta 1554
Query: 181 agtcttccaagcyacagtaattacgagaatcgttgtcttgtttggacttaccacttagtc 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 agtcttccaagctacagtaattacgagaatcgttgtcttgtttggacttaccacttagtc 1614
Query: 241 ttccaactgagggagcatgcttcttcataagttcacgtaaacctaatgctgccccgtgtc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1615 ttccaactgagggagcatgcttcttcataagttcacgtaaacctaatgctgcaccgtgtc 1674
Query: 301 ttatttcccactgttcgttcataagattatctaataggagttcataaattccttggaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 ttatttcccactgttcgttcataagattatctaataggagttcataaattccttggaatt 1734
Query: 361 gccagacgaaccccctaatcttttcatgtttttccaagataggttgcaccattgattcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 gccagacgaaccccctaatcttttcatgtttttccaagataggttgcaccattgattcga 1794
Query: 421 ccattaatctcttctcatcggattgttctgtgatttcaagtttagggttcgttaaagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 ccattaatctcttctcatcggattgttctgtgatttcaagtttagggttcgttaaagtca 1854
Query: 481 ttggtaccggagttggagaatcactcagatcctctttattgggtatcatattacgtgtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 ttggtaccggagttggagaatcactcagatcctctttattgggtatcatattacgtgtgg 1914
Query: 541 cactagactgtgacaaatctacaggttttttgtttaccgttttagcttgaatctttttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 cactagactgtgacaaatctacaggttttttgtttaccgttttagcttgaatctttttct 1974
Query: 601 ttcttcttgccatggccagcattcttgctgatctcttcgattctttcgtttcatttaccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975 ttcttcttgccatggccagcattcttgctgatctcttcgattctttcgtttcatttaccg 2034
Query: 661 tatcctcatctgccagcgaatccgtactattttcctttttcagatcggcaaacgaatcct 720
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 tatcctcatctgcaagcgaatccgtactattttcctttttcagatcggcaaacgaatcct 2094
Query: 721 ctttcttcagatgtttgacattgttagcgtcatcctgttcgatatc 766
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 ctttcttcagatgtttgacattgttagcgtcatcctgttcgatatc 2140
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5983
Number of Sequences: 1807
Number of extensions: 5983
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)